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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs5998366 chr22:32665525 C/T FOXRED2 chr22:36883237-36903148:- 0.67 7.09 4.75E-12 Box Plot
THCA rs5998366 chr22:32665525 C/T GGA1 chr22:38004482-38029571:+ 0.78 9.14 1.77E-18 Box Plot
THCA rs5998366 chr22:32665525 C/T GRAMD4 chr22:46971909-47075687:+ 0.79 7.66 1.01E-13 Box Plot
THCA rs5998366 chr22:32665525 C/T GTPBP1 chr22:39101728-39134304:+ 0.71 8.27 1.36E-15 Box Plot
THCA rs5998366 chr22:32665525 C/T HDAC10 chr22:50683612-50689834:- 0.52 6.56 1.37E-10 Box Plot
THCA rs5998366 chr22:32665525 C/T HIC2 chr22:21771693-21805752:+ 0.48 6.3 6.63E-10 Box Plot
THCA rs5998366 chr22:32665525 C/T HMGXB4 chr22:35653445-35691800:+ 0.43 6.84 2.45E-11 Box Plot
THCA rs5998366 chr22:32665525 C/T HPS4 chr22:26839389-26879803:- 0.67 7.19 2.56E-12 Box Plot
THCA rs5998366 chr22:32665525 C/T HSCB chr22:29138019-29153503:+ 0.83 10.65 6.39E-24 Box Plot
THCA rs5998366 chr22:32665525 C/T INPP5J chr22:31518717-31530682:+ 0.41 5.96 5.04E-9 Box Plot
THCA rs5998366 chr22:32665525 C/T KIAA1467 chr12:13197218-13295455:+ -0.44 -6.21 1.17E-9 Box Plot
THCA rs5998366 chr22:32665525 C/T KLHL22 chr22:20795806-20850170:- 0.8 9.08 2.8E-18 Box Plot
THCA rs5998366 chr22:32665525 C/T L3MBTL2 chr22:41601209-41627275:+ 0.89 8.56 1.55E-16 Box Plot
THCA rs5998366 chr22:32665525 C/T LDOC1L chr22:44888452-44894178:- 0.47 6.84 2.49E-11 Box Plot
THCA rs5998366 chr22:32665525 C/T LMF2 chr22:50941378-50946120:- 0.72 8.83 2.06E-17 Box Plot